Grant Information

EVALUATION OF CITRUS GERMPLASM FOR RESISTANCE OR TOLERANCE TO HUANGLONGBING DISEASE IN PUERTO RICO

Sponsoring Institution National Institute of Food and Agriculture
Status COMPLETE
Funding Source HATCH
Division NIFA Formula
Reporting Frequency Annual
Project Director VITERI, DIEGO
Accession Number 1012400
Project Number PRH-476
Dates 2017-03-16 - 2019-03-12
Animal Health Component 50%
Performing Department Agroenvironmental Sciences
Recipient Organization UNIVERSITY OF PUERTO RICO AT MAYAGUEZ
P. O. BOX 9000
MAYAGUEZ,PR 00681
Keywords 'rico' collection
‘candidatus liberibacter asiaticus’
citrus spp.
huanglongbing
resistance
Research Effort Applied (50%)
Basic (50%)
Developmental (0%)
Classification Parameters
Knowledge AreaSubject of InvestigationField of SciencePercent
202 - Plant Genetic Resources 999 - Citrus, general/other 1080 - Genetics (excludes breeding) 60%
202 - Plant Genetic Resources 999 - Citrus, general/other 1160 - Pathology 40%
Non-technical Summary

Huanglongbing (HLB) caused by the bacteria 'Candidatus Liberibacter asiaticus' (CLa) is a devastating disease in citrus production regions worldwide. The bacterium can attack all parts of the trees canopy and death of trees is observed in susceptible genotypes. The levels of resistance/tolerance in Citrus spp. from the "Rico" collection in Adjuntas are unknown. These genotypes are of interest for Puerto Rico because although some selections were positive to CLa, they did not show severe symptoms and are still productive. Thereby, the levels of resistance/tolerance to HLB in this collection need to be assessed. The objectives of this study are: (1) evaluate the response of the "Rico" citrus genotypes to HLB in the greenhouse, (2) quantify the concentration of the bacteria in the plant tissue (3) identify genotypes with higher levels of resistance/tolerance. Fourteen scions of the "Rico" collection and lime 'Tahití' will be grafted in 'Swingle' and 'HRS 812' rootstocks. Buds from infected HLB tissue will also be grafted into the rootstocks. The plants will be maintained under greenhouse and disease severity will be evaluated periodically. The identification of highly resistant genotypes in local germplasm would be essential for the management of HLB. Likewise, recommendations of better scions and rootstocks will be provided at the end of this project for future field studies.

Goals / Objectives
  1. Evaluate the response of the "Rico" citrus genotypes to Huanglongbing (HLB) disease in the greenhouse at Isabela Research Station-University of Puerto Rico.
  2. Quantify the concentration of 'Candidatus Liberibacter asiaticus' (CLa) by qPCR.
  3. Identify genotypes with higher levels of resistance/tolerance.
Methods (unparsed)

Grafting Citrus spp. and inoculation with CLa in the rootstocks:Scions of fourteen Citrus spp. of different origins belong to the "Rico" collection and lime (cv. Tahití) as susceptible control, will be grafted on 'Swingle citrumelo' (Hutchison, 1974) and HRS 812 (Bowman et al., 1997) rootstocks by the T-budding methodology (Bir and Ranney, 2014). Stem buds of approximately 6 cm-length from HLB infected tissue will be grafted into healthy tissue of the rootstocks using the methodology described above (Bir and Ranney, 2014). The healthy phloem will have contact with the infected one allowing the spread of CLa into the scions.Greenhouse evaluation of HLB Severity:At least four scions/varieties grafted in HRS 812 and Swingle citrumelo rootstocks will be placed in a randomized block design with four replications in a greenhouse in the Isabela AES-UPR. Plants will be kept with a temperature of 24-28 C and 12 h light. HLB severity will be evaluated monthly using a scale from 1-7 described by Rouse et al. (2010); where 1= vigorous tree without HLB symptoms, 2= vigorous tree with mild greening symptoms , 3= trees with mild decline and 10% of greening symptoms in the tree's canopy, 4= trees with moderate decline and 25% of greening symptoms in the tree's canopy, 5= trees with severe decline and 50% of greening symptoms in the tree's canopy, 6=trees with severe decline and 75% of greening symptoms in the tree's canopy, and 7= death of the tree. HLB scores of 1-2 will be considered resistant, 3-4 intermediate, and 5-7 susceptible. Evaluations will be conducted for one and half year.DNA extraction, qPCR, and DNable procedures:Total DNA will be extracted from 200 mg of fresh leaf midribs in a bulk sample of each genotype using the DNeasy Plant Mini Kit (Quiagen, Valencia, CA). DNA will be diluted to 10 μg/ml and 2 μl will be used for molecular analysis.The qPCR will be performed in a 25 μl reaction volume including 250 nM of each primer, 150 nM of target probes, 300 nM (each) internal control primers, 150 nM internal control probes, 6.0 mM Mg Cl2, 250 μM dNTPS, and 1-unit Platinum of Tag DNA polymerase (Invitrogen, Carlsbad, Ca). Li et al. (2006) describe in detail the procedure and the amplification conditions of the qPCR mentioned above. Data will be analyzed using the Smart Cycler software version 2.0 D.Furthermore, DNable procedure will be conducted according to the protocol described by Quantifier-Envirologix in the user Manual DNable to corroborate the presence or absence of CLa in the samples identified by qPCR, previously.Data analysis:Data will be analyzed using SAS 9.4 PROC GLM (SAS, 2012). Mean HLB disease score and area under disease progress curve (AUDPC; Cooke, 2006) will also be calculated. Fisher's least significant difference at P ≤ 0.05 will be calculated for HLB severity and AUDPC values. Moreover, correlations between HLB severity and ct values from qPCR will be conducted.

Project Timeline Tracking

Outputs

Target Audience
Citrus growers in Puerto Rico. Scientists in crop breeding, plant pathology, and horticultural sciences. Technicians, students, extension personnel, and public in general.

Changes / Problems
Nothing Reported

Training & Professional Development
Nothing Reported

Dissemination Streams
By a local conference to citrus growers entitled: Citrus germplasm at University of Puerto Rico: Conservation and its Response to Huanglongbing Disease.

Next Reporting Steps
Nothing Reported

Outputs

Target Audience
Nothing Reported

Changes / Problems
Nothing Reported

Training & Professional Development
Nothing Reported

Dissemination Streams
Nothing Reported

Next Reporting Steps
1) Conduct molecular analysis (conventional PCR, and qPCR) to identify the bacterium concentrations in the genotypes. 2) Evaluate the disease incidence and severity every 3 or 4 months. 3) Identify genotypes with resistance/tolerance to citrus greening. <br><br>

Impacts (unparsed)

<br>What was accomplished under these goals? A total of 16 Citrus genotypes including: Lime (cv. Tahití), Mexican Lime, Fronton, Helada, Lares 82, Padilla, Pietri 334, PR-SEL-1, PR-SEL-2, 6 Rico cultivars, and Salustiana were grafted into Swingle citrumelo and HRS 812 rootstocks. 'Candidatus Liberibacter asiaticus' was inoculated in every rootstock-genotype combinations. <br><br><b>Publications</b><br>

Outputs

Target Audience
Nothing Reported

Changes / Problems
Nothing Reported

Training & Professional Development
Nothing Reported

Dissemination Streams
Nothing Reported

Next Reporting Steps
Inoculate 'Candidatus Liberibacter asiaticus' in every rootstock-genotype combinations and evaluate the disease severity using a scale described by Estévezand Viteri (2016) every 60 days. Conduct molecular analysis (qPCR) to estimate the bacteria concentrations in the plant tissue and correlate with the disease severity. Identify genotypes with resistance/tolerance to citrus greening. <br><br>

Impacts (unparsed)

<br>What was accomplished under these goals? Objectives: 1) Collect and propagate seeds of Swingle citrumelo and HRS 812 rootstocks and (2)Graft scions into the rootstocks Seeds of Swingle citrumelo and HRS 812 were germinated in sand-substrate. After two months, seedlings of both rootstocks were planted in a 5-gal plastic containing coffee and organic matter based substrate. A total of 16 Citrus genotypes including: Lime (cv. Tahití), Mexican Lime, Fronton, Helada, Lares 82, Padilla, Pietri 334, PR-SEL-1, PR-SEL-2, 6 Rico cultivars, and Salustiana were grafted into these rootstocks. These genotypes were placed in a randomized complete block design with three replications in a greenhouse located in the Adjuntas Research Substation at University of Puerto Rico. <br><br><b>Publications</b><br>